CalcAllFlaresThread: remove sap calculations, we dont use those

main/astrodatagui/CalcAllFlaresThread.py

@@ -42,25 +42,6 @@ def getFlareCount(filesDict):
         mkdir_p(starFolder)
 
         lc = lk.read(filesDict["FilePath"])
-        lc.flux = lc["sap_flux"]
-        lc.flux_err = lc["sap_flux_err"]
-        lc = lc.normalize()
-        sapPeaks, sapFits = calculateFlareFitsForLightcurve(lc.flatten())
-        sapValSec, sapTds = getTotalValidDataInSeconds(lc, "sap_flux")
-        sapPeriodogram = lc.to_periodogram()
-        sapPeakPeriod = sapPeriodogram.period[findMaxIndices(sapPeriodogram, num=4, distance=100, sortByHighest=True)[0]]
-        sapEpochTime = getEpochTime(lc)
-        sapFoldedLC = lc.fold(period=sapPeakPeriod, epoch_time=sapEpochTime)
-        sapPhase, sapSineFit, sapFitType = getFoldedBestFit(sapFoldedLC, fitType=filesDict["FitType"])
-        sapMinima, sapMaxima = getFoldedFitPeakValley(sapSineFit)
-        sapminPhasesBounds, sapmaxPhasesBounds = getPhaseRangesNearPeak((sapMinima, sapMaxima), sapPhase, returnPhaseValue=True)
-        sapFoldedPeaks = []
-        sapFoldedPeaksPhasePair = []
-        for peak in sapPeaks:
-            cycle, foldedIndex = convertStarndardIndexToFoldedIndex(sapFoldedLC, peak["StandardIndex"])
-            sapFoldedPeaks.append({"Cycle: ": cycle, "Index": foldedIndex})
-            sapFoldedPeaksPhasePair.append({"Phase": sapFoldedLC.phase[sapFoldedLC.cycle == cycle][foldedIndex], "Peak": peak})
-
         lc.flux = lc["pdcsap_flux"]
         lc.flux_err = lc["pdcsap_flux_err"]
         lc = lc.normalize()
@@ -130,22 +111,6 @@ def getFlareCount(filesDict):
         plt.savefig(f"{starFolder}/{starNameR}_{source}-{sequence}-foldedLC-marked_fit_flares.png")
         plt.close()
         
-
-        filesDict["sapPeaks"] = sapPeaks
-        filesDict["sapPeaksCount"] = len(sapPeaks)
-        filesDict["sapFits"] = sapFits
-        filesDict["sapValidTimespans"] = sapTds
-        filesDict["sapValidSeconds"] = sapValSec
-        filesDict["sapFoldedCycle"] = sapFoldedLC.cycle
-        #filesDict["sapFoldedPhase"] = sapFoldedLC.phase.value
-        #filesDict["sapFoldedFitPhase"] = sapPhase
-        filesDict["sapFoldedFitPhaseStarEnd"] = (sapFoldedLC.phase.value[0], sapFoldedLC.phase.value[-1])
-        filesDict["sapFoldedPeaksPhasePair"] = sapFoldedPeaksPhasePair
-        filesDict["sapPeriod"] = sapPeakPeriod.value
-        filesDict["sapPeriodMinima"] = sapMinima
-        filesDict["sapPeriodMinimaBoundaries"] = sapminPhasesBounds
-        filesDict["sapPeriodMaxima"] = sapMaxima
-        filesDict["sapPeriodMaximaBoundaries"] = sapmaxPhasesBounds
         filesDict["pdcsapPeaks"] = pdcsapPeaks
         filesDict["pdcsapPeaksCount"] = len(pdcsapPeaks)
         filesDict["pdcsapFits"] = pdcsapFits